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Book Chapters
- T. Suda, T. Nakano, and K. Fujii,
``Applications of Biological Concepts to Designs of Computer Networks
and Network Applications," The Handbook of Computer Networks, John
Wiley & Sons Inc, Nov. 2007.
- M. Moore, A. Enomoto, T. Suda, T. Nakano
and Y. Okaie, ``Molecular Communication: New paradigm for
communication among nano-scale biological machines," The Handbook
of Computer Networks, John Wiley & Sons Inc, Nov. 2007.
Journal Papers
- T. Nakano and T. Suda, "Applying Biological
Principles to Designs of Network Services," Elsevier, Applied Soft
Computing, Vol. 7, pp. 870-878, June 2007(invited submission).
- K. Harumoto, T. Nakano, S. Fukumura, S.
Shimojo, and S. Nishio, "Effective Web Browsing Through Content Delivery
Adaptation," ACM Transactions on Internet Technology , Vol. 5, No. 4, Nov.
2005.
- T. Nakano and T. Suda, "Self-Organizing
Network Services with Evolutionary Adaptation," Special Issue on Adaptive
Learning Systems in Communication Networks, IEEE Transactions on Neural
Networks, Vol. 16, No. 5, Sept. 2005.
- T. Nakano, K. Harumoto, S. Shimojo, and S.
Nishio, "A Web Page Transmission Mechanism with Transmission Order Control
of Inline Objects," Systems and Computers in Japan, Vol. 33, No. 4, pp.
14-24, Apr. 2002.
- K. Harumoto, T. Nakano and S. Shimojo, "An
Architecture for Adaptive Multimedia Content Delivery," New Generation
Computing, Vol. 18, No. 4, pp. 375-389, Ohmsha, Ltd. and Springer-Verlag,
Sep. 2000.
Some Other Journal Papers/Magazine Articles
(not in English)
- T. Suda, T. Nakano, A. Enomoto, R.
Egashira, and M. Moore, gMolecular Communication Part II,h Nikkei Byte,
Oct., pp. 80-86, 2005. (in Japanese)
- T. Suda, T. Nakano, A. Enomoto, R.
Egashira, and M. Moore, gMolecular Communication: Part I,h Nikkei Byte,
Sep., pp. 68-75, 2005. (in Japanese)
- K. Kaname, H. Fujimoto, T. Nakano, and S.
Nishio, gResponse Order Rearrangement on a Web Caching Proxy Considering
Pipelined Requests,h IPSJ, Vol. 44, No. 11, pp. 2806-2816, Nov. 2003. (in
Japanese)
- S. Fukumura, T. Nakano, K. Harumoto, S.
Shimojo, and S. Nishio, gA Supporting Tool for Describing Transmission
Order of Multimedia Content,h IPSJ, Vol.43, No.4, pp. 1079-1088, Apr.
2002. (in Japanese)
- T. Nakano, K. Harumoto, S. Shimojo, and S.
Nishio, gAn Effective Web page Transmission with Transmission Order
Control of Inline Objects via a Caching Proxy,h ISPJ, Vol. 43, No. 1, pp.
101-111, Jan, 2002. (in Japanese)
- T. Nakano, K. Kobayashi, T. Okuda, S.
Shimojo, gNGI Project (19): System Development of A2SP (Advanced
Application Service Provider),h UNIX Magazine, Vol.17, No.9, p.p. 190-195,
ASCII, Aug. 2001. (in Japanese)
- T. Seno, T. Nakano, S. Shimojo, gNGI
Project (17): Content Adaptation Mechanisms,h UNIX Magazine, Vol.17, No.7,
p.p. 181-184, ASCII, June, 2001. (in Japanese)
- T. Nakano, K. Harumoto, S. Shimojo, and S.
Nishio, gA WWW Server with Image Quality Control Mechanisms Based on Page
Transmission Latency,h IEICEJ, D-I, Vol. J83-D-1, No.1, p.p. 194-202, Jan.
2000. (in Japanese)
Conference/Workshop Papers
- T. Nakano, Y. H. Hsu, W. C. Tang, T. Suda, D. Lin,
T. Koujin, T. Haraguchi, and Y. Hiraoka, ``Microplatform for Intercellular
Communication," in Proc. Third Annual IEEE International Conference on Nano/Micro
Engineered and Molecular Systems, Jan. 2008.
- J. Q. Liu and T. Nakano, ``An Information
Theoretic Model of Molecular Communication Media Based on Cellular Signaling,"
in Proc. Workshop on Computing and Communications from Biological Systems: Theory
and Applications, Dec. 2007.
- T. Nakano, T. Suda, T. Koujin, T. Haraguchi, Y.
Hiraoka, ``Molecular Communication through Gap Junction Channels: System Design,
Experiments and Modeling," in Proc. 2nd International Conference on Bio-Inspired
Models of Network, Information, and Computing Systems (BIONETICS 2007), Dec.
2007.
- M. Moore, A. Enomoto, T. Nakano, Y. Okaie, and T. Suda,
``Interfacing Nanomachines with Molecular Communication," Workshop
on eNetworks Cyberengineering: Infrastructures for Cyber-Physical Ecosystems,
Canada, Oct. 2007 (invited submission).
- A. Enomoto, M. Moore, T. Nakano, R.
Egashira, T. Suda, H. Kojima, H. Sakibara and K. Oiwa, "
A Molecular Communication System Using a Network of Cytoskeletal Filaments
," in Proc. of the 2006
NSTI Nanotechnology Conference, May 2006.
- M. Moore, A. Enomoto, T. Nakano, R.
Egashira, T. Suda, A. Kayasuga, H. Kojima, H. Sakakibara and K. Oiwa, "A
Design of a Molecular Communication System for Nanomachines Using
Molecular Motors," in Proc. of the First IEEE International Workshop on
Pervasive and Ubiquitous Health Care (UbiCare 2006), Italy, March 2006.
- T. Nakano, T. Suda, M. Moore, R. Egashira,
A. Enomoto, and K. Arima, ``Molecular Communication for Nanomachines Using
Intercellular Calcium Signaling," in Proc. of the IEEE NANO 2005, Japan,
July 2005.
- T. Suda, M. Moore, T. Nakano, R. Egashira
and A. Enomoto, "Exploratory Research on Molecular Communication between
Nanomachines," in Proc. of the Genetic and Evolutionary Computation
Conference 2005 (GECCO 2005), Late-breaking Papers, U.S.A., June 2005.
- N. M. Su, Y. Wang, G. Mark, T. Aieylokun and T.
Nakano, "A Bosom Buddy Afar Brings a Distant Land Near: Are Bloggers a
Global Community?," in Proc. of the 2nd International Conference on
Communities and Technologies, Italy, June 2005.
- S. Hiyama, Y. Moritani, T. Suda, R. Egashira, A.
Enomoto, M. Moore and T. Nakano, "Molecular Communication," in
Proc. of the 2005 NSTI Nanotechnology Conference, poster presentation,
U.S.A., May 2005.
- T. Nakano and T. Suda, "Adaptive and
Evolvable Network Services," 2004 Genetic and Evolutionary Computation
Conference (GECCO 2004), Lecture Notes in Computer Science, Springer, vol.
3102, pp. 151-162 (ISBN:3-540-22344-4), U.S.A., June 2004.
(Nominated for the Best Paper Award.)
- T. Nakano and T. Suda, "Evolution and
Adaptation of Distributed Network Services," in Proc. of the 2004
International Symposium on Applications and the Internet (SAINT2004)
Workshop on Service Oriented Computing, pp. 360-367, Japan, Jan. 2004.
- S. Fukumura, T. Nakano, K. Harumoto, S.
Shimojo, and S. Nishio, "Realization of Personalized Presentation for
Digital Contents Based on Browsing History," in Proc. of the IEEE Pacific
Rim Conference on Communications, Computers and Signal Processing (PACRIM
2003), pp. 927-930, Canada, Aug. 2003.
- J. Suzuki, T. Nakano, K. Fujii, N. Ikeda
and T. Suda, "Dynamic Reconfiguration of Network Applications and
Middleware Systems in the Bio-Networking Architecture," in Proc. of the
IEEE Workshop on Large Scale Real-Time and Embedded Systems, U.S.A., Dec.
2002.
- T. Nakano, K. Harumoto, S. Shimojo and S.
Nishio, "User Adaptive Content Delivery Mechanism on the World Wide Web,"
in Proc. of the 17th ACM Symposium on Applied Computing (SAC2002), pp.
1140-1146, Spain, Mar. 2002.
- H. Fujimoto, T. Nakano, K. Harumoto and S.
Nishio, "Response Order Rearrangement on a Caching Proxy for Reducing WWW
Latency," in Proc. of the 17th ACM Symposium on Applied Computing
(SAC2002), pp. 845-851, Spain, Mar. 2002.
- T. Nakano, K. Harumoto, S. Shimojo and S.
Nishio, "Extending Hypertext Streaming Protocol to Realize Effective Web
Page Transmission Via a Caching Proxy," in Proc. of the 16th ACM Symposium
on Applied Computing (SAC2001), U.S.A., pp. 440-445, Mar. 2001.
- T. Nakano, K. Harumoto, S. Shimojo and S.
Nishio, "Controlling Transmission Order of Inline Objects for Effective
Web Page Publishing," in Proc. of the 2000 ACM Symposium on Applied
Computing (SAC2000), Vol. 2, pp. 942-947, Italy, Mar. 2000.
- K. Harumoto, T. Nakano, S. Shimojo and S.
Nishio "A WWW Server with Media Scaling Mechanism Based on Page
Transmission Latency," in Proc. of the 1999 IEEE Pacific Rim Conference on
Communications, Computers and Signal Processing (PACRIM'99), pp. 444-447,
Canada, Aug. 1999.
Oral/Poster Presentations (with short or no
manuscripts, non refereed)
- T. Nakano, M. Moore, A. Enomoto, T. Suda,
T. Koujin, T. Haraguchi, and Y. Hiraoka, ``A Cell-based Molecular Communication
Network," poster presentation, Bio Inspired mOdels of NEtwork, Information and
Computing Systems (BIONETICS 2006), Italy, Dec., 2006.
- M. Moore, A. Enomoto, T. Nakano, T. Suda,
A. Kayasuga, H. Kojima, H. Sakakibara and K. Oiwa, ``Simulation of a
Molecular Motor Based Communication Network," poster presentation, Bio
Inspired mOdels of NEtwork, Information and Computing Systems (BIONETICS
2006), Italy, Dec., 2006.
- T. Nakano, A. Enomoto, M. Moore, R.
Egashira, T. Suda, K. Oiwa, Y. Hiraoka, T. Haraguchi, R. Nakamori, T.
Koujin, "A Design of a Molecular Communication System Using Biological
Communication Mechanisms," The 20th IEEE Computer Communications Workshop,
Oct. 2005. (invited talk)
- T. Suda, A. Enomoto, R. Egashira, T. Nakano,
M. Moore, S. Hiyama, and Y. Moritani, "Exploratory Research on Molecular
Based Nano Scale Communication," poster presentation, IEEE INFOCOM 2005,
U.S.A., March 2005.
- Y. Moritani, S. Hiyama, T. Suda, R. Egashira, A.
Enomoto, M. Moore, and T. Nakano, "Molecular Communication between
Nanomachines," poster presentation, IEEE INFOCOM 2005, U.S.A., March 2005.
- T. Nakano and T. Suda, "Evolvable
Networking Architecture," poster presentation, Cal-(IT)2 day, University
of California, San Diego, Sept. 2003.
- T. Nakano and T. Suda, "Adaptive
Replication and Migration Protocols for Internet Applications," poster
presentation, AFSOR MURI PI meeting, Sept. 2002.
Papers/Presentations by Undergraduate Students
Advised
- Vishakh, N. Urrea, T. Nakano, and T. Suda,
"A Resource Allocation Mechanism for Multiagent Systems," in Proc. of the
Undergraduate Student Workshop, Genetic and Evolutionary Computation
Conference 2005 (GECCO 2005), U.S.A., June 2005.
- J. Shuai, J., K. Cho, D. Iwaki, T. Nakano,
and T. Suda, "Cooperative Coevolution in the Bio-Networking Architecture",
poster presentation, 2005 UCI Undergraduate Research Symposium, May, 2005.
- J. Ko, R. Motiwala, M. Galal, O. Zarka, T.
Nakano and T. Suda, "Molecular Communication Systems Based on
Engineered Cell Communication," poster presentation, 2005 UCI
Undergraduate Research Symposium, May 2005.
- Vishakh, N. Urrea, T. Nakano and T. Suda,
"An Interaction Model for Mobile Agent Services Using Social Networks,"
ACM Crossroads, Special Issue of Human-Computer Interactions, 2005.
- A. Nguyen, T. Nakano and T. Suda, "Learning
from Nature: Network Architecture Inspired by Biology," ACM Crossroads,
Special Issue of Human-Computer Interactions, 2005.
- Vishakh, T. Nakano and T. Suda, "Increasing
Robustness in the Bio-Networking Architecture: a Distributed Approach,"
oral presentation, 2004 UCI Undergraduate Research Symposium, May 2004.
- A. Nguyen, N. Urrea, T. Nakano and T. Suda,
"On the Resource Allocation in Large-Scale Distributed Networks," oral and
poster presentations, 2004 UCI Undergraduate Research Symposium, May 2004.
- Vishakh, T. Nakano and T. Suda, "Increasing
Robustness in the Bio-Networking Architecture: an Economic approach,"
poster presentation, Southern California Conference on Undergraduate
Research, Nov. 2003.
- C. Ryan Tang, T. Nakano and T. Suda,
"Self-Adaptive Evolution and Diversity in the Bio-net Architecture,"
poster presentation, UCI Undergraduate Research Symposium, May 2003.
Technical Reports
- T. Suda, M. Moore, T. Nakano, R. Egashira,
A. Enomoto, "Exploratory Research in Molecular Communication between
Nanomachines," Technical Report 05-3, School of Information and Computer
Science, University of California, Irvine, 2005.
- T. Nakano and T. Suda, "Evolution and
Adaptation of the Bio-Networking Architecture," Technical Report 04-21,
School of Information and Computer Science, University of California,
Irvine, 2004.
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