Describes efficient sequential and parallel algorithms for orienting the edges of an undirected planar graph so that each vertex has few outgoing edges. From such an orientation one can test in constant time whether a given edge exists. One consequence is a parallel algorithm to list all subgraphs isomorphic to \(K_3\) or \(K_4\).
It was known that planar graphs have O(n) subgraphs isomorphic to K3 or K4. That is, K3 and K4 have linear subgraph multiplicity. This paper shows that the graphs with linear subgraph multiplicity in the planar graphs are exactly the 3-connected planar graphs. Also, the graphs with linear subgraph multiplicity in the outerplanar graphs are exactly the 2-connected outerplanar graphs.
More generally, let F be a minor-closed family, and let x be the smallest number such that some complete bipartite graph Kx,y is a forbidden minor for F. Then the x-connected graphs have linear subgraph multiplicity for F, and there exists an (x − 1)-connected graph (namely Kx − 1,x − 1) that does not have linear subgraph multiplicity. When x ≤ 3 or when x = 4 and the minimal forbidden minors for F are triangle-free, then the graphs with linear subgraph multiplicity for F are exactly the x-connected graphs.
Please refer only to the journal version, and not the earlier technical report: the technical report had a bug that was repaired in the journal version.
For any sparse family of graphs, one can list in linear time all complete bipartite subgraphs of a graph in the family. There are O(n) complete bipartite subgraphs of a graph in the family, and the sum of the numbers of vertices in these subgraphs is also O(n).
Nowadays these results can also be interpreted as a form of formal concept analysis. If a set of objects and attributes is sparse (e.g., if it is generated by adding objects and attributes one at a time, where each newly-added object is given O(1) attributes and each newly-added attribute is held by O(1) objects) then the total size of all concepts in its concept lattice is linear, and this lattice may be generated in linear time.
Uses an idea of Baker to cover a planar graph with subgraphs of low treewidth. As a consequence, any fixed pattern can be found as a subgraph in linear time; the same methods can be used to solve other planar graph problems including vertex connectivity, diameter, girth, induced subgraph isomorphism, and shortest paths. A companion paper, "Diameter and treewidth in minor-closed graph families", presents a result announced in the conference version of this paper, that exactly characterizes the minor-closed graph families for which the same techniques apply.
This paper introduces the diameter-treewidth property (later known as bounded local treewidth): a functional relationship between the diameter of its graph and its treewidth. Previously known results imply that planar graphs have bounded local treewidth; we characterize the other minor-closed families with this property. Specifically, minor-closed family F has bounded local treewidth if and only if there exists an apex graph G that is not in F; an apex graph is a graph that can be made planar by removing a single vertex. The minor-free families that exclude an apex graph (and therefore have bounded local treewidth) include the bounded-genus graphs (for which, as with planar graphs, we show a linear bound for the treewidth as a function of the diameter) and K3,a-free graphs. As a consequence, subgraph isomorphism for subgraphs of bounded size and approximations to several NP-hard optimization problems can be computed efficiently on these graphs, extending previous results for planar graphs.
Some of these results were announced in the conference version of "subgraph isomorphism for planar graphs and related problems" but not included in the journal version. Since its publication, there have been many more works on local treewidth. The class of problems that could be solved quickly on graphs of bounded local treewidth was extended and classified by Frick and Grohe, "Deciding first-order properties of locally tree-decomposable structures", J. ACM 48: 1184–1206, 2001; the proof that bounded local treewidth is equivalent to having an excluded apex minor was simplified, and the dependence of the treewidth on diameter improved, by a subsequent paper of Demaine and Hajiaghayi, "Diameter and treewidth in minor-closed graph families, revisited", Algorithmica 40: 211–215, 2004. The concept of local treewidth is the basis for the theory of bidimensionality, a general framework for fixed-parameter-tractable algorithms and approximation algorithms in minor-closed graph families; for a survey, see Demaine and Hajiaghayi, "The bidimensionality theory and its algorithmic applications", The Computer J. 51: 292–302, 2008.
We describe a new method of drawing graphs, based on allowing the edges to be merged together and drawn as "tracks" (similar to train tracks). We present heuristics for finding such drawings based on my previous algorithms for finding maximal bipartite subgraphs, prove that several important families of graphs have confluent drawings, and provide examples of other graphs that can not be drawn in this way.
We formalize problems of finding large approximately-matching regions of two related but not completely isomorphic quadrilateral meshes, show that these problems are NP-complete, and describe a natural greedy heuristic that is guaranteed to find good matches when the mismatching parts of the meshes are small.
We define the h-index of a graph to be the maximum h such that the graph has h vertices each of which has degree at least h. We show that the h-index, and a partition of the graph into high and low degree vertices, may be maintained in constant time per update. Based on this technique, we show how to maintain the number of triangles in a dynamic graph in time O(h) per update; this problem is motivated by Markov Chain Monte Caro simulation of the Exponential Random Graph Model used for simulation of social networks. We also prove bounds on the h-index for scale-free graphs and investigate the behavior of the h-index on a corpus of real social networks.
We describe an algorithm for finding all maximal cliques in a graph, in time O(dn3d/3) where n is the number of vertices and d is the degeneracy of the graph, a standard measure of its sparsity. This time bound matches the worst-case output size for these parameters. The algorithm modifies the Bron-Kerbosch algorithm for maximal cliques by ordering the vertices by degree in the outer recursive call of the algorithm.
For the journal version, see "Listing all maximal cliques in large sparse real-world graphs in near-optimal time," which combines results from this and a different conference paper.
An earlier paper with Spiro at WADS 2009 provided dynamic graph algorithms for counting how many copies of each possible type of subgraph there are in a larger undirected graph, when the subgraphs have at most three vertices. This paper extends the method to directed graphs and to larger numbers of vertices per subgraph.
We experiment with our degeneracy-based algorithm for listing maximal cliques in sparse graphs and show that it works well on large graphs drawn from several repositories of real-world social networks and bioinformatics networks.
For the journal version, see "Listing all maximal cliques in large sparse real-world graphs in near-optimal time", which combines results from this and a different conference paper.
This paper combines our theoretical results on clique-finding algorithms from ISAAC 2010 with our experimental results on the same algorithms from SEA 2011. We show how to list all maximal cliques in graphs of bounded degeneracy in time that is linear in the size of the graph and near-optimal in the degeneracy, and we show that low degeneracy explains the good behavior of the algorithm in our experiments on large real-world social networks.
We investigate the number of vertices that must be deleted from an arbitrary graph, in the worst case as a function of the number of edges, in order to planarize the remaining graph. We show that m/5.22 vertices are sufficient and m/(6 − o(1)) are necessary, and we also give bounds for the number of deletions needed to achieve certain subclasses of planar graphs.
We show that bit-parallel algorithm design techniques, on a machine of word size w, can speed up the time for sparse set intersection by a factor of log w/w. The main data structure underlying our algorithms is the cuckoo filter, a variant of cuckoo hash tables that has operations similar to a Bloom filter but outperforms Bloom filters in several respects.
We provide a partial classification of the complexity of parameterized graph problems of the form "find a \(k\)-vertex induced subgraph with property \(X\) in a larger subgraph with property \(Y\)", in terms of the existence of large cliques and large independent sets in the graphs with properties \(X\) and \(Y\).
Graph Theory – Publications – David Eppstein – Theory Group – Inf. & Comp. Sci. – UC Irvine
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