Center for Algorithms and Theory of Computation

CS 269S, Winter 2019: Theory Seminar
Bren Hall, Room 1423, 1pm


April 19, 2019:

Minimum Width Drawings of Phylogenetic Trees

Martha Osegueda

We show that finding a minimum-width orthogonal upward drawing of a phylogenetic tree is NP-hard if the ordering of leaves is unconstrained and we provide a linear time algorithm for ordered trees. We also study a couple heuristic algorithms for the unconstrained case and compare experimental results.

Joint work with Juan Besa, Michael Goodrich, and Timothy Johnson