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Summarize annotation statistics. Collects the summary statistics for the table and column and write it to the outFile. If no correlate column is provided, will just get a count histogram. If the correlate column IS specified, then will do a correlation analysis by the finding the mean and standard deviation of the correlate column's value for each "bin" of the primary column.
If specify a list of columns with respective multiple minValue, maxValue, increment and scalar, then will find an n-dimensional histogram, 1 dimension for each column.
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In the simplest case, when the histogram or correlation is only in 1 dimension, effectively just returns a list of 2-ples, containing the histogram bin min from this sequence from range(minValue,maxValue,increment) and the bin max from the same sequence, but each with an added "increment." However, for multi-dimensional histograms, have to expand out the list, multiplying by the range for each extra dimension. For d-dimensions, should return a list of parameter tuples, each 2*d items long. |
Recursive function to build the parameter sets. paramSets - List to extend in the base case with another parameter set tuple. currentParamSet - The parameter set tuple built so far. Will grow with successive recursions until reach base case of all histogram dimensions accounted for, and a tuple is added to the paramSets. |
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